MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0232 · 46 genes shown · anchor nrdB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0232 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0232 nrdB (requalified) — R2-like ligand-binding oxidase nrdB fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 php (requalified) — phosphotriesterase-related protein php Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv1061 (requalified) — class II glutamine amidotransferase Rv1061 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv1171 (family_assigned) — hypothetical protein Rv1171 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 ltp1 (requalified) — lipid-transfer protein ltp1 fadB (requalified) — fatty oxidation protein FadB fadB accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 echA16 (requalified) — enoyl-CoA hydratase echA16 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c Rv2250A (family_assigned) — Possible flavoprotein Rv2250A Rv1635c (family_assigned) — glycosyltransferase family 39 protein Rv1635c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c Rv3828c (requalified) — resolvase Rv3828c Rv3827c (requalified) — transposase Rv3827c phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv0188 (requalified) — SPW repeat protein Rv0188 echA21 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA21 rslA (requalified) — anti-sigma-L factor RslA rslA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.