MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0216 · 46 genes shown · anchor fadE3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0216 (family_assigned) — MaoC family dehydratase Rv0216 fadE3 (family_assigned) — Probable acyl-CoA dehydrogenase FadE3 fadE3 icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 fadB (requalified) — fatty oxidation protein FadB fadB echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 pepA (family_assigned) — S1C family serine protease pepA marP (requalified) — acid resistance serine protease MarP marP htrA (requalified) — serine protease HtrA htrA Rv1043c (requalified) — serine protease Rv1043c pepD (requalified) — serine protease PepD pepD plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 acn (requalified) — iron-regulated aconitate hydratase Acn acn Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c mdh (requalified) — malate dehydrogenase mdh fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 mpa (requalified) — proteasome ATPase mpa treS (requalified) — maltose alpha-D-glucosyltransferase treS glpK (requalified) — glycerol kinase GlpK glpK mak (requalified) — maltokinase mak mec (requalified) — CysO-cysteine peptidase mec prcA (family_assigned) — proteasome subunit alpha prcA Rv3672c (requalified) — CoA pyrophosphatase Rv3672c nth (requalified) — endonuclease III nth

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.