MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0210 · 46 genes shown · anchor trmB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0209 (family_assigned) — hypothetical protein Rv0209 trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c Rv2474c (family_assigned) — hypothetical protein Rv2474c rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 mmpL3 (requalified) — trehalose monomycolate RND transporter MmpL3 mmpL3 papA3 (requalified) — acyltransferase PapA3 papA3 Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c papA1 (requalified) — acyltransferase PapA1 papA1 pckA (requalified) — phosphoenolpyruvate carboxykinase (GTP) pckA trmI (requalified) — tRNA (adenine(58)-N(1))-methyltransferase TrmI trmI truB (requalified) — tRNA pseudouridine(55) synthase TruB truB aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv3802c (requalified) — phospholipase Rv3802c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv2475c (family_assigned) — thioesterase family protein Rv2475c gdh (requalified) — NAD-glutamate dehydrogenase gdh ettA (requalified) — energy-dependent translational throttle protein Et ettA Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0358 (requalified) — peptidase M50 Rv0358 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2688c (family_assigned) — ABC transporter ATP-binding protein Rv2688c rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0955 (family_assigned) — DUF6350 family protein Rv0955 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv3909 (dark) — hypothetical protein Rv3909 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv2739c (requalified) — glycosyltransferase Rv2739c mmpL10 (requalified) — RND transporter MmpL10 mmpL10 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c Rv0227c (family_assigned) — membrane protein Rv0227c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.