MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0208c · 46 genes shown · anchor mmpL3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c trmI (requalified) — tRNA (adenine(58)-N(1))-methyltransferase TrmI trmI mmpL3 (requalified) — trehalose monomycolate RND transporter MmpL3 mmpL3 Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0209 (family_assigned) — hypothetical protein Rv0209 truB (requalified) — tRNA pseudouridine(55) synthase TruB truB rpmD (requalified) — 50S ribosomal protein L30 rpmD fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu dusB (requalified) — tRNA dihydrouridine synthase DusB dusB truA (requalified) — tRNA pseudouridine synthase A truA serS (requalified) — serine--tRNA ligase serS rphA (requalified) — ribonuclease PH rphA aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv3802c (requalified) — phospholipase Rv3802c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv2119 (family_assigned) — RecB family exonuclease Rv2119 Rv2689c (requalified) — class I SAM-dependent RNA methyltransferase Rv2689c rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ secG (family_assigned) — preprotein translocase subunit SecG secG Rv3909 (dark) — hypothetical protein Rv3909 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv2739c (requalified) — glycosyltransferase Rv2739c Rv2474c (family_assigned) — hypothetical protein Rv2474c rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c pckA (requalified) — phosphoenolpyruvate carboxykinase (GTP) pckA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA infB (requalified) — translation initiation factor IF-2 infB pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv2795c (requalified) — metallophosphoesterase Rv2795c rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP rpsS (requalified) — 30S ribosomal protein S19 rpsS fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA desA1 (requalified) — acyl-ACP desaturase DesA desA1 Rv3282 (requalified) — nucleoside triphosphate pyrophosphatase Rv3282

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.