MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0206c · 46 genes shown · anchor trmB · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpL3 (requalified) — trehalose monomycolate RND transporter MmpL3 mmpL3 Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv3909 (dark) — hypothetical protein Rv3909 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv2739c (requalified) — glycosyltransferase Rv2739c Rv2843 (family_assigned) — hypothetical protein Rv2843 Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv0209 (family_assigned) — hypothetical protein Rv0209 Rv3755c (family_assigned) — putative glycolipid-binding domain-containing prot Rv3755c rskA (requalified) — anti-sigma-K factor RskA rskA aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv3802c (requalified) — phospholipase Rv3802c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB trmI (requalified) — tRNA (adenine(58)-N(1))-methyltransferase TrmI trmI truB (requalified) — tRNA pseudouridine(55) synthase TruB truB Rv2474c (family_assigned) — hypothetical protein Rv2474c rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 serS (requalified) — serine--tRNA ligase serS Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c ephG (requalified) — epoxide hydrolase ephG Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB ptrp (family_assigned) — hypothetical protein ptrp ftsQ (requalified) — cell division protein FtsQ ftsQ eno (requalified) — phosphopyruvate hydratase eno Rv1025 (dark) — hypothetical protein Rv1025 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 mfd (requalified) — transcription-repair coupling factor mfd lpqU (requalified) — lytic murein transglycosylase lpqU pckA (requalified) — phosphoenolpyruvate carboxykinase (GTP) pckA proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.