MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0201c · 46 genes shown · anchor mmpL11 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0201c (family_assigned) — XRE family transcriptional regulator Rv0201c mmpL11 (requalified) — RND transporter MmpL11 mmpL11 Rv0203 (requalified) — hemophore Rv0203 Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c Rv0205 (family_assigned) — AI-2E family transporter Rv0205 omamB (requalified) — hypothetical protein omamB omamA (requalified) — hypothetical protein omamA trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB esxT (family_assigned) — WXG100 family type VII secretion target esxT Rv1972 (requalified) — Mce associated membrane protein Rv1972 Rv0177 (requalified) — Mce associated protein Rv0177 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 Rv3909 (dark) — hypothetical protein Rv3909 Rv1101c (family_assigned) — AI-2E family transporter Rv1101c aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 mmpL3 (requalified) — trehalose monomycolate RND transporter MmpL3 mmpL3 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 Rv1157c (dark) — hypothetical protein Rv1157c mmpS4 (requalified) — siderophore RND transporter accessory protein MmpS mmpS4 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 trmI (requalified) — tRNA (adenine(58)-N(1))-methyltransferase TrmI trmI Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv0209 (family_assigned) — hypothetical protein Rv0209 truB (requalified) — tRNA pseudouridine(55) synthase TruB truB esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 rplM (requalified) — 50S ribosomal protein L13 rplM mce3F (family_assigned) — MlaD family protein mce3F mce3C (family_assigned) — virulence factor Mce family protein mce3C Rv1973 (family_assigned) — hypothetical protein Rv1973 lprM (family_assigned) — Mce family lipoprotein LprM lprM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.