MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0197 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0197 (requalified) — oxidoreductase Rv0197 Rv0196 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0196 qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 gltB (family_assigned) — glutamate synthase large subunit gltB Rv0295c (family_assigned) — Stf0 family sulfotransferase Rv0295c Rv0195 (requalified) — response regulator transcription factor Rv0195 qcrA (requalified) — hypothetical protein qcrA Rv3273 (requalified) — transmembrane carbonic anhydrase Rv3273 narH (family_assigned) — nitrate reductase subunit beta narH Rv0210 (family_assigned) — hypothetical protein Rv0210 fdhD (requalified) — formate dehydrogenase accessory sulfurtransferase fdhD Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE rpsL (requalified) — 30S ribosomal protein S12 rpsL tsf (requalified) — translation elongation factor Ts tsf rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ltp1 (requalified) — lipid-transfer protein ltp1 fadB (requalified) — fatty oxidation protein FadB fadB accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 echA16 (requalified) — enoyl-CoA hydratase echA16 gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 Rv0296c (requalified) — sulfatase Rv0296c papA3 (requalified) — acyltransferase PapA3 papA3 lprB (family_assigned) — DUF3558 domain-containing protein lprB papA1 (requalified) — acyltransferase PapA1 papA1 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.