MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0195 · 46 genes shown · anchor narS · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0195 (requalified) — response regulator transcription factor Rv0195 Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 Rv0193c (family_assigned) — hypothetical protein Rv0193c narL (requalified) — two-component system response regulator NarL narL devR (requalified) — two-component system response regulator DevR devR dosT (requalified) — two-component system sensor histidine kinase DosT dosT devS (requalified) — two-component system sensor histidine kinase DevS devS Rv0197 (requalified) — oxidoreductase Rv0197 Rv0196 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0196 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr virS (family_assigned) — AraC family transcriptional regulator virS Rv0603 (family_assigned) — hypothetical protein Rv0603 Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv0890c (family_assigned) — HTH-type transcriptional regulator Rv0890c Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3114 (requalified) — nucleoside deaminase Rv3114 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv3208 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3208 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3134c (requalified) — universal stress protein Rv3134c Rv2005c (requalified) — universal stress protein Rv2005c Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv2026c (requalified) — universal stress protein Rv2026c acg (family_assigned) — FMN-binding protein Acg acg Rv2028c (requalified) — universal stress protein Rv2028c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX Rv2624c (requalified) — universal stress protein Rv2624c qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 gltB (family_assigned) — glutamate synthase large subunit gltB Rv0295c (family_assigned) — Stf0 family sulfotransferase Rv0295c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.