MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0186 · 45 genes shown · anchor galK · open gene page → · ← back to 1 hop

Evidence: Min score 0
bglS (requalified) — beta-glucosidase BglS bglS aglA (family_assigned) — glycoside hydrolase family 13 protein aglA Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 celA1 (requalified) — cellulase CelA celA1 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 galK (requalified) — galactokinase galK Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv0183 (requalified) — monoacylglycerol lipase Rv0183 xylB (requalified) — FGGY-family carbohydrate kinase xylB sigG (family_assigned) — sigma-70 family RNA polymerase sigma factor SigG sigG Rv3242c (family_assigned) — ComF family protein Rv3242c mak (requalified) — maltokinase mak glbO (requalified) — group 2 truncated hemoglobin GlbO glbO treS (requalified) — maltose alpha-D-glucosyltransferase treS malQ (requalified) — 4-alpha-glucanotransferase malQ Rv2469c (requalified) — HNH endonuclease Rv2469c Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv0061c (dark) — hypothetical protein Rv0061c Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 spmT (requalified) — sphingomyelinase spmT Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1135A (family_assigned) — Possible acetyl-CoA acetyltransferase (acetoacetyl Rv1135A Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c radA (requalified) — DNA repair protein RadA radA Rv3035 (family_assigned) — hypothetical protein Rv3035 recA (requalified) — intein-containing recombinase RecA recA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv0648 (requalified) — alpha-mannosidase Rv0648 Rv0745 (family_assigned) — hypothetical protein Rv0745 gltB (family_assigned) — glutamate synthase large subunit gltB guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv3577 (requalified) — hypothetical protein Rv3577 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.