MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0181c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0181c (family_assigned) — pirin family protein Rv0181c Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c sigG (family_assigned) — sigma-70 family RNA polymerase sigma factor SigG sigG lprO (family_assigned) — phosphodiester glycosidase family protein lprO Rv0183 (requalified) — monoacylglycerol lipase Rv0183 Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c bglS (requalified) — beta-glucosidase BglS bglS Rv0654 (requalified) — carotenoid cleavage oxygenase Rv0654 Rv0887c (family_assigned) — VOC family protein Rv0887c fprB (requalified) — FAD-dependent oxidoreductase fprB vapC15 (family_assigned) — PIN domain nuclease vapC15 Rv1006 (family_assigned) — hypothetical protein Rv1006 hsr1 (requalified) — hypothetical protein hsr1 Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM wag31 (requalified) — cell wall synthesis protein Wag31 wag31 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD pirG (requalified) — exported repetitive protein pirG ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB radA (requalified) — DNA repair protein RadA radA Rv3035 (family_assigned) — hypothetical protein Rv3035 recA (requalified) — intein-containing recombinase RecA recA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 aglA (family_assigned) — glycoside hydrolase family 13 protein aglA celA1 (requalified) — cellulase CelA celA1 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.