MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0179c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lprO (family_assigned) — phosphodiester glycosidase family protein lprO wag31 (requalified) — cell wall synthesis protein Wag31 wag31 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD pirG (requalified) — exported repetitive protein pirG Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv0181c (family_assigned) — pirin family protein Rv0181c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1987 (family_assigned) — cellulose-binding protein Rv1987 sigG (family_assigned) — sigma-70 family RNA polymerase sigma factor SigG sigG Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c lprN (family_assigned) — Mce family lipoprotein LprN lprN Rv2144c (dark) — hypothetical protein Rv2144c ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2147c (requalified) — cell division protein SepF Rv2147c rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 Rv1006 (family_assigned) — hypothetical protein Rv1006 hsr1 (requalified) — hypothetical protein hsr1 Rv3434c (family_assigned) — rhomboid-like protein Rv3434c Rv2598 (family_assigned) — DUF2617 family protein Rv2598 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv0183 (requalified) — monoacylglycerol lipase Rv0183 Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv1157c (dark) — hypothetical protein Rv1157c Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.