MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0178 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB moxR2 (family_assigned) — MoxR family ATPase moxR2 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA mas (requalified) — mycocerosate synthase mas pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mce1B (family_assigned) — virulence factor Mce family protein mce1B mce1D (family_assigned) — virulence factor Mce family protein mce1D mce1A (family_assigned) — Mce family protein Mce1A mce1A pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC yrbE1A (family_assigned) — ABC transporter permease yrbE1A lprK (family_assigned) — virulence factor Mce family protein lprK yrbE1B (family_assigned) — ABC transporter permease yrbE1B phoT (family_assigned) — phosphate ABC transporter ATP-binding protein PstB phoT pstA1 (family_assigned) — phosphate ABC transporter permease PstA pstA1 pstA2 (family_assigned) — phosphate ABC transporter permease PstA pstA2 pstB (family_assigned) — phosphate ABC transporter ATP-binding protein pstB Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pknA (requalified) — serine/threonine protein kinase PknA pknA garA (requalified) — glycogen accumulation regulator GarA garA fhaA (requalified) — cell division-associated protein FhaA fhaA fhaB (family_assigned) — FHA domain-containing protein fhaB rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA Rv3693 (family_assigned) — DUF58 domain-containing protein Rv3693 Rv3691 (family_assigned) — hypothetical protein Rv3691 Rv1453 (family_assigned) — PucR family transcriptional regulator Rv1453 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 glf (requalified) — UDP-galactopyranose mutase glf lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.