MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0176 · 29 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv0178 (requalified) — Mce associated membrane protein Rv0178 mce1F (family_assigned) — MCE family protein mce1F mce1D (family_assigned) — virulence factor Mce family protein mce1D mce1C (family_assigned) — MCE family protein mce1C mce1A (family_assigned) — Mce family protein Mce1A mce1A Rv0177 (requalified) — Mce associated protein Rv0177 eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 lprK (family_assigned) — virulence factor Mce family protein lprK ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA mce1B (family_assigned) — virulence factor Mce family protein mce1B yrbE1A (family_assigned) — ABC transporter permease yrbE1A phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 yrbE1B (family_assigned) — ABC transporter permease yrbE1B pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccA5 (family_assigned) — type VII secretion system ESX-5 AAA family ATPase eccA5 mltG (requalified) — endolytic transglycosylase MltG mltG Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 glf (requalified) — UDP-galactopyranose mutase glf lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt mkl (family_assigned) — ABC transporter ATP-binding protein mkl

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.