MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0164 · 46 genes shown · anchor adhE1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
TB18.5 (family_assigned) — hypothetical protein TB18.5 Rv0163 (family_assigned) — thioesterase family protein Rv0163 adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 pirG (requalified) — exported repetitive protein pirG rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv3058c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3058c Rv0857 (family_assigned) — hypothetical protein Rv0857 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv0856 (family_assigned) — hypothetical protein Rv0856 ppiA (requalified) — iron-regulated peptidyl-prolyl cis-trans isomerase ppiA pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas pks1 (requalified) — polyketide synthase pks1 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aldA (requalified) — aldehyde dehydrogenase aldA dhaA (requalified) — haloalkane dehalogenase dhaA far (requalified) — fatty-acid-CoA racemase far Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv3197 (family_assigned) — AarF/ABC1/UbiB kinase family protein Rv3197 Rv3679 (family_assigned) — ArsA family ATPase Rv3679 Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 Rv0502 (family_assigned) — lysophospholipid acyltransferase family protein Rv0502 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 sigF (requalified) — RNA polymerase sigma factor SigF sigF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 rsfB (family_assigned) — STAS domain-containing protein rsfB usfY (family_assigned) — hypothetical protein usfY Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.