MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0143c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0143c (requalified) — chloride channel protein Rv0143c Rv0144 (family_assigned) — transcriptional regulator Rv0144 Rv1762c (family_assigned) — heavy metal-binding domain-containing protein Rv1762c helZ (requalified) — DEAD/DEAH box helicase helZ gadB (requalified) — glutamate decarboxylase gadB Rv0145 (requalified) — class I SAM-dependent methyltransferase Rv0145 Rv0146 (requalified) — class I SAM-dependent methyltransferase Rv0146 Rv3256c (requalified) — TobH protein Rv3256c lppD (requalified) — lipoprotein LppD lppD pcnA (requalified) — poly(A) polymerase PcnA pcnA bpoB (requalified) — peroxidase BpoB bpoB Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv1761c (family_assigned) — DUF5073 family protein Rv1761c Rv1775 (family_assigned) — hypothetical protein Rv1775 gltB (family_assigned) — glutamate synthase large subunit gltB Rv2113 (family_assigned) — integral membrane protein Rv2113 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT ptrp (family_assigned) — hypothetical protein ptrp Rv2102 (family_assigned) — hypothetical protein Rv2102 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv2133c (family_assigned) — SCO1664 family protein Rv2133c panC (requalified) — pantoate--beta-alanine ligase panC gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0149 (family_assigned) — NADPH:quinone oxidoreductase family protein Rv0149 manA (requalified) — mannose-6-phosphate isomerase%2C class I manA pmmA (requalified) — phosphomannomutase/phosphoglucomutase pmmA cei (requalified) — envelope integrity protein Cei cei Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv0358 (requalified) — peptidase M50 Rv0358 lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ cobB (requalified) — NAD-dependent protein deacylase cobB cinA (requalified) — competence/damage-inducible protein A cinA Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv3906c (requalified) — pullulanase Rv3906c dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB mutT4 (requalified) — NUDIX hydrolase mutT4 Rv3909 (dark) — hypothetical protein Rv3909

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.