MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0134 · 46 genes shown · anchor hpx · open gene page → · ← back to 1 hop

Evidence: Min score 0
ephF (family_assigned) — alpha/beta hydrolase ephF hpx (requalified) — non-heme haloperoxidase Hpx hpx bpoC (family_assigned) — alpha/beta hydrolase bpoC pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv0077c (family_assigned) — alpha/beta hydrolase Rv0077c pepD (requalified) — serine protease PepD pepD hsaD (requalified) — alpha/beta fold hydrolase hsaD Rv3254 (requalified) — oxidoreductase Rv3254 pks1 (requalified) — polyketide synthase pks1 Rv3177 (family_assigned) — alpha/beta hydrolase Rv3177 Rv2296 (requalified) — haloalkane dehalogenase Rv2296 Rv1833c (requalified) — haloalkane dehalogenase Rv1833c Rv3172c (dark) — hypothetical protein Rv3172c menC (requalified) — o-succinylbenzoate synthase menC Rv0552 (requalified) — amidohydrolase Rv0552 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB papA1 (requalified) — acyltransferase PapA1 papA1 Rv0078 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0078 Rv0076c (family_assigned) — membrane protein Rv0076c Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 mprB (requalified) — two-component system sensor histidine kinase MprB mprB mpa (requalified) — proteasome ATPase mpa htpX (requalified) — zinc metalloprotease HtpX htpX mprA (requalified) — two-component system response regulator MprA mprA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA hsaB (family_assigned) — flavin-dependent monooxygenase reductase subunit H hsaB fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv3572 (family_assigned) — hypothetical protein Rv3572 ptrp (family_assigned) — hypothetical protein ptrp iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.