MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0128 · 46 genes shown · anchor mak · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0128 (family_assigned) — YoaK family protein Rv0128 mak (requalified) — maltokinase mak treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 papA1 (requalified) — acyltransferase PapA1 papA1 papA3 (requalified) — acyltransferase PapA3 papA3 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c pepA (family_assigned) — S1C family serine protease pepA mmpL2 (requalified) — RND transporter MmpL2 mmpL2 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 aglA (family_assigned) — glycoside hydrolase family 13 protein aglA glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB malQ (requalified) — 4-alpha-glucanotransferase malQ glgA (requalified) — glycogen synthase glgA treY (requalified) — maltooligosyl trehalose synthase treY treX (requalified) — maltooligosyl trehalose synthase treX otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv0205 (family_assigned) — AI-2E family transporter Rv0205 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 rsmA (requalified) — anti-sigma-M factor RsmA rsmA pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks13 (requalified) — polyketide synthase Pks13 pks13 mmpL8 (requalified) — sulfolipid-1 RND transporter MmpL8 mmpL8 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 mmpL10 (requalified) — RND transporter MmpL10 mmpL10 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE bpa (requalified) — proteasome activator protein Bpa bpa rfbD (family_assigned) — ABC transporter permease rfbD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.