MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0115 · 46 genes shown · anchor gmhB · open gene page → · ← back to 1 hop

Evidence: Min score 0
hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gca (requalified) — GDP-mannose 4%2C6-dehydratase gca rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv0139 (family_assigned) — NAD-dependent epimerase/dehydratase family protein Rv0139 galE2 (family_assigned) — SDR family oxidoreductase galE2 ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA erm(37) (requalified) — 23S rRNA (adenine(2058)-N(6))-methyltransferase Er erm(37) Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c ligD (requalified) — ATP-dependent DNA ligase ligD ligB (requalified) — ATP-dependent DNA ligase ligB ligC (requalified) — ATP-dependent DNA ligase ligC mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv3032 (requalified) — glycogen synthase Rv3032 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA epiA (requalified) — GDP-L-fucose synthase epiA rpsS (requalified) — 30S ribosomal protein S19 rpsS rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv1510 (family_assigned) — hypothetical protein Rv1510 pmmA (requalified) — phosphomannomutase/phosphoglucomutase pmmA pmmB (requalified) — phospho-sugar mutase pmmB wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 lcp1 (requalified) — phosphotransferase Lcp1 lcp1 galE1 (requalified) — UDP-glucose 4-epimerase galE1 galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c glf (requalified) — UDP-galactopyranose mutase glf pks12 (requalified) — type I polyketide synthase pks12 rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA Rv0140 (family_assigned) — DUF427 domain-containing protein Rv0140 Rv0502 (family_assigned) — lysophospholipid acyltransferase family protein Rv0502 rpfB (requalified) — resuscitation-promoting factor RpfB rpfB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.