MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0112 · 46 genes shown · anchor gmhA · open gene page → · ← back to 1 hop

Evidence: Min score 0
gca (requalified) — GDP-mannose 4%2C6-dehydratase gca gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA epiA (requalified) — GDP-L-fucose synthase epiA rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB Rv1513 (family_assigned) — FkbM family methyltransferase Rv1513 rplD (requalified) — 50S ribosomal protein L4 rplD Rv1514c (family_assigned) — glycosyltransferase family 2 protein Rv1514c mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv3032 (requalified) — glycogen synthase Rv3032 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA ligD (requalified) — ATP-dependent DNA ligase ligD ligB (requalified) — ATP-dependent DNA ligase ligB ligC (requalified) — ATP-dependent DNA ligase ligC rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA Rv1508A (family_assigned) — hypothetical protein Rv1508A rpsH (requalified) — 30S ribosomal protein S8 rpsH rplS (requalified) — 50S ribosomal protein L19 rplS rplB (requalified) — 50S ribosomal protein L2 rplB rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplP (requalified) — 50S ribosomal protein L16 rplP rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsP (requalified) — 30S ribosomal protein S16 rpsP rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rplT (requalified) — 50S ribosomal protein L20 rplT rpsI (requalified) — 30S ribosomal protein S9 rpsI rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rplQ (requalified) — 50S ribosomal protein L17 rplQ rplU (requalified) — 50S ribosomal protein L21 rplU

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.