MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0110 · 46 genes shown · anchor PE_PGRS1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0110 (family_assigned) — integral membrane protein Rv0110 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 Rv0108c (family_assigned) — hypothetical protein Rv0108c ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c PE_PGRS1 (family_assigned) — PE-PGRS family protein PE_PGRS1 PE_PGRS1 Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA tatB (requalified) — Sec-independent protein translocase protein TatB tatB Rv0111 (family_assigned) — acyltransferase family protein Rv0111 Rv3365c (requalified) — sensor histidine kinase Rv3365c Rv1487 (family_assigned) — NfeD family protein Rv1487 Rv1489 (family_assigned) — hypothetical protein Rv1489 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 mpa (requalified) — proteasome ATPase mpa lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 pepR (family_assigned) — pitrilysin family protein pepR Rv3091 (family_assigned) — patatin-like phospholipase family protein Rv3091 Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 metH (requalified) — methionine synthase metH ctpI (requalified) — cation-transporter ATPase I ctpI Rv0863 (family_assigned) — hypothetical protein Rv0863 Rv0546c (family_assigned) — VOC family protein Rv0546c birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA folE (requalified) — GTP cyclohydrolase I FolE folE folB (requalified) — dihydroneopterin aldolase folB folP1 (requalified) — dihydropteroate synthase folP1 rplS (requalified) — 50S ribosomal protein L19 rplS purN (requalified) — phosphoribosylglycinamide formyltransferase purN folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv0102 (requalified) — cytochrome c oxidase assembly protein Rv0102 PPE1 (family_assigned) — PPE family protein PPE1 PPE1 nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c recR (requalified) — recombination mediator RecR recR trxC (requalified) — thioredoxin trxC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.