MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0101 · 30 genes shown · anchor pks13 · open gene page → · ← back to 1 hop

Evidence: Min score 0
nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp pks13 (requalified) — polyketide synthase Pks13 pks13 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC Rv0100 (requalified) — acyl carrier protein Rv0100 pks12 (requalified) — type I polyketide synthase pks12 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH fas (requalified) — fatty acid synthase fas fadD32 (requalified) — long-chain-fatty-acid--AMP ligase FadD32 fadD32 accD4 (family_assigned) — acyl-CoA carboxylase subunit beta accD4 mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA mbtE (requalified) — peptide synthetase mbtE mbtC (requalified) — polyketide synthetase MbtC mbtC PPE1 (family_assigned) — PPE family protein PPE1 PPE1 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD papA1 (requalified) — acyltransferase PapA1 papA1 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD Rv0095c (family_assigned) — hypothetical protein Rv0095c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c ppsA (requalified) — phthiocerol type I polyketide synthase PpsA ppsA fadD26 (requalified) — long-chain-fatty-acid--AMP ligase FAAL26/FadD26 fadD26

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.