MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0089 · 32 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0089 (requalified) — methyltransferase Rv0089 Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv0088 (requalified) — polyketide cyclase/dehydrase Rv0088 hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD hycQ (requalified) — hydrogenase HycQ hycQ hycP (family_assigned) — hypothetical protein hycP hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 Rv0083 (requalified) — oxidoreductase Rv0083 Rv0081 (family_assigned) — lsr2/espR transcriptional regulator Rv0081 bioD (requalified) — dethiobiotin synthase bioD bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA Rv2715 (family_assigned) — alpha/beta hydrolase Rv2715 Rv2577 (family_assigned) — metallophosphoesterase family protein Rv2577 Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv2963 (requalified) — permease Rv2963 sapM (requalified) — phosphatidylinositol-3-phosphatase sapM Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL bioB (requalified) — biotin synthase BioB bioB bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 Rv1571 (family_assigned) — 2'-5' RNA ligase family protein Rv1571 bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2 cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS Rv1567c (family_assigned) — membrane protein Rv1567c Rv2716 (family_assigned) — PhzF family phenazine biosynthesis protein Rv2716 Rv2714 (family_assigned) — PAC2 family protein Rv2714 sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.