MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0078A · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0078A (family_assigned) — hypothetical protein Rv0078A Rv0078B (family_assigned) — hypothetical protein Rv0078B Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 Rv0079 (requalified) — dormancy-associated translation inhibitor Rv0079 fic (family_assigned) — Fic/DOC family protein fic Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv2514c (family_assigned) — DUF4411 family protein Rv2514c Rv2827c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv2827c Rv0229c (family_assigned) — PIN domain nuclease Rv0229c Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0836c (family_assigned) — hypothetical protein Rv0836c Rv0268c (family_assigned) — hypothetical protein Rv0268c Rv1044 (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv1044 Rv3134c (requalified) — universal stress protein Rv3134c Rv1996 (requalified) — universal stress protein Rv1996 Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 TB31.7 (requalified) — universal stress protein TB31.7 TB31.7 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsS (requalified) — 30S ribosomal protein S19 rpsS Rv3642c (family_assigned) — antitoxin VbhA family protein Rv3642c Rv3640c (family_assigned) — IS256-like element IS1553 family transposase Rv3640c Rv2970A (family_assigned) — hypothetical protein Rv2970A otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 rpfC (requalified) — resuscitation-promoting factor RpfC rpfC otsB2 (requalified) — trehalose-phosphatase otsB2 devS (requalified) — two-component system sensor histidine kinase DevS devS devR (requalified) — two-component system response regulator DevR devR nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv2005c (requalified) — universal stress protein Rv2005c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX cyp135B1 (requalified) — cytochrome P450 cyp135B1 Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2516c (dark) — hypothetical protein Rv2516c Rv2517c (dark) — hypothetical protein Rv2517c Rv2826c (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv2826c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv2825c (dark) — hypothetical protein Rv2825c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.