MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0071 · 41 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 Rv3428c (requalified) — transposase Rv3428c Rv2424c (requalified) — transposase Rv2424c Rv2177c (requalified) — transposase Rv2177c istB (family_assigned) — IS21-like element ISMt2 family helper ATPase IstB istB Rv2944 (requalified) — insertion sequence element IS1533 transposase Rv2944 Rv3387 (requalified) — transposase Rv3387 Rv1366 (family_assigned) — GTP pyrophosphokinase family protein Rv1366 Rv3638 (family_assigned) — ATP-binding protein Rv3638 Rv3386 (requalified) — transposase Rv3386 Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c cas1 (requalified) — CRISPR-associated endonuclease Cas1 cas1 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv2943A (requalified) — transposase Rv2943A Rv2943 (requalified) — insertion sequence element IS1533 transposase Rv2943 Rv2426c (family_assigned) — MoxR family ATPase Rv2426c Rv2425c (family_assigned) — VWA domain-containing protein Rv2425c proA (requalified) — glutamate-5-semialdehyde dehydrogenase proA aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG dnaB (requalified) — replicative DNA helicase dnaB mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapB46 (requalified) — antitoxin VapB46 vapB46 Rv1366A (family_assigned) — hypothetical protein Rv1366A Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv2813 (family_assigned) — ExeA family protein Rv2813 Rv2961 (requalified) — transposase Rv2961 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv2514c (family_assigned) — DUF4411 family protein Rv2514c Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.