MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0060 · 46 genes shown · anchor dnaB · open gene page → · ← back to 1 hop

Evidence: Min score 0
darG (requalified) — toxin-antitoxin system antitoxin DNA ADP-ribosyl g darG darT (requalified) — toxin-antitoxin system toxin DarT darT dnaB (requalified) — replicative DNA helicase dnaB rplI (requalified) — 50S ribosomal protein L9 rplI Rv0057 (dark) — hypothetical protein Rv0057 Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c cobB (requalified) — NAD-dependent protein deacylase cobB Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0909 (requalified) — antitoxin Rv0909 Rv1546 (family_assigned) — SRPBCC family protein Rv1546 Rv1545 (dark) — hypothetical protein Rv1545 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 iniB (requalified) — isoniazid-induced protein IniB iniB PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 dnaG (requalified) — DNA primase dnaG ssb (family_assigned) — single-stranded DNA-binding protein ssb Rv2943A (requalified) — transposase Rv2943A rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP recG (requalified) — ATP-dependent DNA helicase RecG recG Rv2974c (family_assigned) — hypothetical protein Rv2974c Rv2975c (family_assigned) — hypothetical protein Rv2975c rnpA (requalified) — ribonuclease P protein component rnpA rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadE (requalified) — NAD(+) synthase nadE Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA Rv1044 (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv1044 Rv2209 (requalified) — MFS transporter Rv2209 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2367c (requalified) — endoribonuclease Rv2367c Rv2366c (family_assigned) — hemolysin family protein Rv2366c Rv2365c (requalified) — cytidine deaminase Rv2365c era (requalified) — GTPase Era era

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.