MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0057 · 46 genes shown · anchor dnaB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0057 (dark) — hypothetical protein Rv0057 dnaB (requalified) — replicative DNA helicase dnaB rplI (requalified) — 50S ribosomal protein L9 rplI rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 ssb (family_assigned) — single-stranded DNA-binding protein ssb darT (requalified) — toxin-antitoxin system toxin DarT darT darG (requalified) — toxin-antitoxin system antitoxin DNA ADP-ribosyl g darG rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0010c (family_assigned) — PH domain-containing protein Rv0010c dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c crgA (requalified) — cell division protein CrgA crgA rpmH (requalified) — 50S ribosomal protein L34 rpmH dnaG (requalified) — DNA primase dnaG Rv2943A (requalified) — transposase Rv2943A rplS (requalified) — 50S ribosomal protein L19 rplS rplB (requalified) — 50S ribosomal protein L2 rplB rpsH (requalified) — 30S ribosomal protein S8 rpsH rplP (requalified) — 50S ribosomal protein L16 rplP rplN (requalified) — 50S ribosomal protein L14 rplN rpsM (requalified) — 30S ribosomal protein S13 rpsM rpmI (requalified) — 50S ribosomal protein L35 rpmI rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsT (requalified) — 30S ribosomal protein S20 rpsT Rv2478c (family_assigned) — hypothetical protein Rv2478c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 iniB (requalified) — isoniazid-induced protein IniB iniB PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c cobB (requalified) — NAD-dependent protein deacylase cobB rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG Rv3839 (requalified) — DUF2470 domain-containing protein Rv3839 cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 Rv2732c (family_assigned) — hypothetical protein Rv2732c lppM (requalified) — lipoprotein LppM lppM Rv1100 (family_assigned) — hypothetical protein Rv1100 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recF (requalified) — DNA replication/repair protein RecF recF parA (requalified) — chromosome partitioning protein ParA parA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.