MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0052 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0052 (family_assigned) — hypothetical protein Rv0052 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 Rv1931c (family_assigned) — transcriptional regulator Rv1931c rpsF (requalified) — 30S ribosomal protein S6 rpsF lexA (requalified) — transcriptional repressor LexA lexA sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB pncA (requalified) — pyrazinamidase PncA pncA Rv2074 (requalified) — F420-dependent biliverdin reductase Rv2074 Rv2025c (family_assigned) — cation diffusion facilitator family transporter Rv2025c Rv2704 (family_assigned) — RidA family protein Rv2704 Rv3256c (requalified) — TobH protein Rv3256c pimE (requalified) — mannosyltransferase pimE Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv1930c (requalified) — glutamine amidotransferase Rv1930c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 recA (requalified) — intein-containing recombinase RecA recA chiZ (requalified) — cell wall hydrolase ChiZ chiZ nrdR (family_assigned) — transcriptional regulator NrdR nrdR dinX (requalified) — DNA polymerase IV dinX recN (requalified) — DNA repair protein RecN recN dinP (requalified) — DNA polymerase IV dinP rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.