MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0038 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0894 (family_assigned) — hypothetical protein Rv0894 nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdH (requalified) — redoxin NrdH nrdH nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdB (requalified) — R2-like ligand-binding oxidase nrdB tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1487 (family_assigned) — NfeD family protein Rv1487 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv1489 (family_assigned) — hypothetical protein Rv1489 mpa (requalified) — proteasome ATPase mpa lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR embR (requalified) — response regulator transcription factor EmbR embR Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA cobB (requalified) — NAD-dependent protein deacylase cobB nadE (requalified) — NAD(+) synthase nadE ppnK (requalified) — NAD kinase ppnK pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.