MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0033 · 45 genes shown · anchor fadD34 · open gene page → · ← back to 1 hop

Evidence: Min score 0
acpA (requalified) — acyl carrier protein acpA fadD34 (requalified) — fatty-acid--CoA ligase FadD34 fadD34 fas (requalified) — fatty acid synthase fas Rv0034 (family_assigned) — nuclear transport factor 2 family protein Rv0034 bioF2 (family_assigned) — pyridoxal phosphate-dependent aminotransferase fam bioF2 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtE (requalified) — peptide synthetase mbtE PPE35 (family_assigned) — PPE family protein PPE35 PPE35 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv1907c (dark) — hypothetical protein Rv1907c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 bioD (requalified) — dethiobiotin synthase bioD nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoA (family_assigned) — NADH-quinone oxidoreductase subunit A nuoA nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM nuoK (family_assigned) — NADH-quinone oxidoreductase subunit NuoK nuoK nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH kasA (requalified) — 3-oxoacyl-ACP synthase KasA kasA kasB (requalified) — 3-oxoacyl-ACP synthase 2 kasB pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA pks13 (requalified) — polyketide synthase Pks13 pks13 mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtC (requalified) — polyketide synthetase MbtC mbtC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.