MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0024 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0024 (family_assigned) — C40 family peptidase Rv0024 Rv0023 (family_assigned) — helix-turn-helix transcriptional regulator Rv0023 Rv0025 (dark) — DUF4226 domain-containing protein Rv0025 whiB5 (family_assigned) — transcriptional regulator WhiB5 whiB5 Rv0026 (dark) — hypothetical protein Rv0026 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA ripC (requalified) — peptidoglycan hydrolase RipC ripC Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv2974c (family_assigned) — hypothetical protein Rv2974c Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv2704 (family_assigned) — RidA family protein Rv2704 rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 Rv0028 (family_assigned) — DUF2694 domain-containing protein Rv0028 Rv0027 (family_assigned) — ESX-1 secretion-associated protein Rv0027 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB pirG (requalified) — exported repetitive protein pirG ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c Rv2189c (dark) — hypothetical protein Rv2189c fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA Rv0175 (family_assigned) — hypothetical protein Rv0175 pimB (requalified) — GDP-mannose-dependent alpha-(1-6)-phosphatidylinos pimB Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD gadB (requalified) — glutamate decarboxylase gadB Rv2975c (family_assigned) — hypothetical protein Rv2975c recG (requalified) — ATP-dependent DNA helicase RecG recG Rv2417c (family_assigned) — DegV family protein Rv2417c Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 Rv3717 (family_assigned) — hypothetical protein Rv3717 trxC (requalified) — thioredoxin trxC Rv0948c (requalified) — chorismate mutase Rv0948c murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.