MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0023 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0023 (family_assigned) — helix-turn-helix transcriptional regulator Rv0023 Rv0025 (dark) — DUF4226 domain-containing protein Rv0025 Rv0024 (family_assigned) — C40 family peptidase Rv0024 whiB5 (family_assigned) — transcriptional regulator WhiB5 whiB5 Rv0028 (family_assigned) — DUF2694 domain-containing protein Rv0028 Rv0027 (family_assigned) — ESX-1 secretion-associated protein Rv0027 Rv0026 (dark) — hypothetical protein Rv0026 Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv0366c (family_assigned) — zeta toxin family protein Rv0366c adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv0081 (family_assigned) — lsr2/espR transcriptional regulator Rv0081 argR (requalified) — arginine repressor argR Rv2034 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2034 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA ripC (requalified) — peptidoglycan hydrolase RipC ripC mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv0029 (dark) — DUF5631 domain-containing protein Rv0029 Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c Rv0333 (family_assigned) — nuclear transport factor 2 family protein Rv0333 rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA plsC (family_assigned) — HAD-IB family hydrolase plsC Rv0367c (family_assigned) — hypothetical protein Rv0367c Rv0365c (family_assigned) — glycoside hydrolase family 76 protein Rv0365c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0369c (requalified) — membrane oxidoreductase Rv0369c Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 ramB (family_assigned) — acetate metabolism transcriptional regulator RamB ramB adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 Rv2191 (family_assigned) — hypothetical protein Rv2191 nudC (requalified) — NAD(+) diphosphatase nudC radA (requalified) — DNA repair protein RadA radA Rv3200c (family_assigned) — potassium channel family protein Rv3200c Rv0082 (family_assigned) — NADH-quinone oxidoreductase subunit B family prote Rv0082 Rv0083 (requalified) — oxidoreductase Rv0083 hycP (family_assigned) — hypothetical protein hycP hycQ (requalified) — hydrogenase HycQ hycQ hycD (family_assigned) — respiratory chain complex I subunit 1 family prote hycD hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ argB (requalified) — acetylglutamate kinase argB argD (requalified) — acetylornithine transaminase argD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.