MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3918c · 45 genes shown · anchor parB · open gene page → · ← back to 1 hop

Evidence: Min score 0
parA (requalified) — chromosome partitioning protein ParA parA parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c yidC (requalified) — membrane protein insertase YidC yidC yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv2647 (requalified) — hypothetical protein Rv2647 ftsK (requalified) — DNA translocase FtsK ftsK rnpA (requalified) — ribonuclease P protein component rnpA dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv3916c (requalified) — acetyltransferase Rv3916c rpmH (requalified) — 50S ribosomal protein L34 rpmH ffh (requalified) — signal recognition particle protein ffh Rv1708 (requalified) — initiation inhibitor protein Rv1708 Rv3213c (family_assigned) — AAA family ATPase Rv3213c engA (requalified) — ribosome biogenesis GTPase Der engA Rv2908c (family_assigned) — RNA-binding protein Rv2908c secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 rho (requalified) — transcription termination factor Rho rho rplB (requalified) — 50S ribosomal protein L2 rplB Rv2646 (requalified) — tyrosine-type recombinase/integrase Rv2646 Rv2645 (family_assigned) — hypothetical protein Rv2645 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB xerC (requalified) — tyrosine recombinase XerC xerC rpsL (requalified) — 30S ribosomal protein S12 rpsL rplD (requalified) — 50S ribosomal protein L4 rplD dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK dnaB (requalified) — replicative DNA helicase dnaB recF (requalified) — DNA replication/repair protein RecF recF Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv3304 (requalified) — gamma-glutamylcyclotransferase Rv3304 Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv0857 (family_assigned) — hypothetical protein Rv0857 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU rpsO (requalified) — 30S ribosomal protein S15 rpsO rpmJ (requalified) — 50S ribosomal protein L36 rpmJ ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.