MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3917c · 46 genes shown · anchor parA · open gene page → · ← back to 1 hop

Evidence: Min score 0
parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB parA (requalified) — chromosome partitioning protein ParA parA gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv1708 (requalified) — initiation inhibitor protein Rv1708 Rv3213c (family_assigned) — AAA family ATPase Rv3213c Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c yidC (requalified) — membrane protein insertase YidC yidC ftsK (requalified) — DNA translocase FtsK ftsK yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv3916c (requalified) — acetyltransferase Rv3916c rnpA (requalified) — ribonuclease P protein component rnpA rpmH (requalified) — 50S ribosomal protein L34 rpmH xerD (requalified) — site-specific tyrosine recombinase XerD xerD Rv2647 (requalified) — hypothetical protein Rv2647 engA (requalified) — ribosome biogenesis GTPase Der engA scpA (requalified) — segregation/condensation protein A scpA scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 entC (requalified) — isochorismate synthase entC gpm2 (requalified) — phosphoglycerate mutase gpm2 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv2908c (family_assigned) — RNA-binding protein Rv2908c secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB xerC (requalified) — tyrosine recombinase XerC xerC rho (requalified) — transcription termination factor Rho rho rplB (requalified) — 50S ribosomal protein L2 rplB Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv3304 (requalified) — gamma-glutamylcyclotransferase Rv3304 Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv0857 (family_assigned) — hypothetical protein Rv0857 Rv0854 (family_assigned) — SRPBCC family protein Rv0854 rpsL (requalified) — 30S ribosomal protein S12 rpsL rplD (requalified) — 50S ribosomal protein L4 rplD rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU rpsO (requalified) — 30S ribosomal protein S15 rpsO rpmJ (requalified) — 50S ribosomal protein L36 rpmJ Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 pyrG (requalified) — CTP synthase pyrG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.