MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3915 · 46 genes shown · anchor trxC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 Rv3717 (family_assigned) — hypothetical protein Rv3717 trxC (requalified) — thioredoxin trxC Rv0948c (requalified) — chorismate mutase Rv0948c murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 Rv3311 (family_assigned) — primosomal protein Rv3311 mutT4 (requalified) — NUDIX hydrolase mutT4 35kd_ag (family_assigned) — hypothetical protein 35kd_ag sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv3716c (family_assigned) — YbaB/EbfC family nucleoid-associated protein Rv3716c recR (requalified) — recombination mediator RecR recR rsmA (requalified) — anti-sigma-M factor RsmA rsmA murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG aroF (requalified) — chorismate synthase aroF tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv1885c (requalified) — chorismate mutase Rv1885c glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX Rv2180c (family_assigned) — integral membrane protein Rv2180c Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 Rv2468c (requalified) — hypothetical protein Rv2468c trxB1 (requalified) — thioredoxin trxB1 csd (requalified) — cysteine desulfurase csd ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1324 (requalified) — co-chaperone YbbN Rv1324 trxA (family_assigned) — thioredoxin family protein trxA ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 tagA (requalified) — DNA-3-methyladenine glycosylase I tagA folP2 (requalified) — dihydropteroate synthase folP2 gpgS (requalified) — glucosyl-3-phosphoglycerate synthase gpgS Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.