MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3914 · 43 genes shown · anchor trxB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
trxC (requalified) — thioredoxin trxC trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 mutT4 (requalified) — NUDIX hydrolase mutT4 Rv3909 (dark) — hypothetical protein Rv3909 htpG (requalified) — molecular chaperone HtpG htpG arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC groEL2 (requalified) — chaperonin GroEL groEL2 groEL1 (requalified) — chaperonin GroEL groEL1 trxB1 (requalified) — thioredoxin trxB1 csd (requalified) — cysteine desulfurase csd ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1324 (requalified) — co-chaperone YbbN Rv1324 trxA (family_assigned) — thioredoxin family protein trxA Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv0948c (requalified) — chorismate mutase Rv0948c murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c sigC (requalified) — RNA polymerase sigma factor SigC sigC fhaA (requalified) — cell division-associated protein FhaA fhaA Rv3906c (requalified) — pullulanase Rv3906c dnaK (requalified) — molecular chaperone DnaK dnaK Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c Rv2264c (family_assigned) — Hsp70 family protein Rv2264c hrcA (requalified) — heat-inducible transcriptional repressor HrcA hrcA Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c pcnA (requalified) — poly(A) polymerase PcnA pcnA Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv0312 (family_assigned) — Hsp70 family protein Rv0312 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 Rv2642 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2642 cadI (requalified) — cadmium-induced metalloenzyme CadI cadI Rv2640c (family_assigned) — Rv2640c family ArsR-like transcriptional regulator Rv2640c Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ groES (requalified) — chaperonin GroES groES hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE grpE (requalified) — nucleotide exchange factor GrpE grpE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.