MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3898c · 29 genes shown · anchor eccC2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv3898c (dark) — hypothetical protein Rv3898c Rv3897c (dark) — hypothetical protein Rv3897c pykA (requalified) — pyruvate kinase pykA Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv3899c (family_assigned) — hypothetical protein Rv3899c eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 Rv3896c (requalified) — transglycosylase Rv3896c eno (requalified) — phosphopyruvate hydratase eno rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplB (requalified) — 50S ribosomal protein L2 rplB rplE (requalified) — 50S ribosomal protein L5 rplE rplF (requalified) — 50S ribosomal protein L6 rplF Rv3901c (dark) — hypothetical protein Rv3901c pks8 (requalified) — polyketide synthase pks8 Rv0945 (requalified) — oxidoreductase Rv0945 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.