MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3895c · 41 genes shown · anchor eccC2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3896c (requalified) — transglycosylase Rv3896c mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 Rv3900c (family_assigned) — hypothetical protein Rv3900c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c eccA5 (family_assigned) — type VII secretion system ESX-5 AAA family ATPase eccA5 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.