MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3894c · 44 genes shown · anchor eccB5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv3896c (requalified) — transglycosylase Rv3896c Rv3899c (family_assigned) — hypothetical protein Rv3899c esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv3786c (family_assigned) — peptidoglycan DD-metalloendopeptidase family prote Rv3786c Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 esxT (family_assigned) — WXG100 family type VII secretion target esxT eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 esxA (requalified) — ESAT-6 protein EsxA esxA eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL esxW (requalified) — type VII secretion system protein EsxW esxW eccA5 (family_assigned) — type VII secretion system ESX-5 AAA family ATPase eccA5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.