MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3892c · 46 genes shown · anchor PE36 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE69 (family_assigned) — PPE family protein PPE69 PPE69 PE36 (family_assigned) — PE family protein PE36 PE36 esxD (family_assigned) — WXG100 family type VII secretion target esxD esxC (family_assigned) — WXG100 family type VII secretion target esxC eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 PPE63 (family_assigned) — PPE family protein PPE63 PPE63 lppB (family_assigned) — LppA family lipoprotein lppB fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH lppA (family_assigned) — LppA family lipoprotein lppA PPE57 (family_assigned) — PPE family protein PPE57 PPE57 PPE59 (family_assigned) — PPE family protein PPE59 PPE59 PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 PE_PGRS47 (family_assigned) — PE-PGRS family protein PE_PGRS47 PE_PGRS47 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 Rv3896c (requalified) — transglycosylase Rv3896c espG2 (requalified) — type VII secretion system ESX-2 associated protein espG2 esxG (requalified) — type VII secretion system protein EsxG esxG esxN (requalified) — ESAT-6 like protein EsxN esxN eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD Rv3538 (requalified) — dehydrogenase Rv3538 PE25 (family_assigned) — PE family protein PE25 PE25 lipY (requalified) — triacylglycerol lipase Lip lipY vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 gltB (family_assigned) — glutamate synthase large subunit gltB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c narH (family_assigned) — nitrate reductase subunit beta narH PPE58 (family_assigned) — PPE family protein PPE58 PPE58 Rv3424c (dark) — hypothetical protein Rv3424c esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB esxA (requalified) — ESAT-6 protein EsxA esxA PPE39 (family_assigned) — PPE family protein PPE39 PPE39 Rv1255c (family_assigned) — helix-turn-helix domain-containing protein Rv1255c Rv2658c (family_assigned) — hypothetical protein Rv2658c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.