MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3891c · 42 genes shown · anchor esxC · open gene page → · ← back to 1 hop

Evidence: Min score 0
esxD (family_assigned) — WXG100 family type VII secretion target esxD esxC (family_assigned) — WXG100 family type VII secretion target esxC PPE69 (family_assigned) — PPE family protein PPE69 PPE69 PE36 (family_assigned) — PE family protein PE36 PE36 espG2 (requalified) — type VII secretion system ESX-2 associated protein espG2 esxG (requalified) — type VII secretion system protein EsxG esxG esxN (requalified) — ESAT-6 like protein EsxN esxN PPE17 (family_assigned) — PPE family protein PPE17 PPE17 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 PPE63 (family_assigned) — PPE family protein PPE63 PPE63 lppB (family_assigned) — LppA family lipoprotein lppB eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 Rv3896c (requalified) — transglycosylase Rv3896c Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 esxH (requalified) — type VII secretion system effector EsxH esxH espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 esxR (family_assigned) — WXG100 family type VII secretion target esxR esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ PPE4 (family_assigned) — PPE family protein PPE4 PPE4 esxK (requalified) — type VII secretion system ESX-5 protein EsxJ esxK esxP (requalified) — type VII secretion system ESX-5 protein EsxJ esxP esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxW (requalified) — type VII secretion system protein EsxW esxW esxO (requalified) — type VII secretion system effector EsxO esxO esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL lipX (requalified) — lipase LipX lipX mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c PE25 (family_assigned) — PE family protein PE25 PE25 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c Rv2558 (family_assigned) — hypothetical protein Rv2558 esxT (family_assigned) — WXG100 family type VII secretion target esxT eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.