MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3887c · 36 genes shown · anchor mycP2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 Rv3899c (family_assigned) — hypothetical protein Rv3899c eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 glpK (requalified) — glycerol kinase GlpK glpK mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 espG2 (requalified) — type VII secretion system ESX-2 associated protein espG2 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv3900c (family_assigned) — hypothetical protein Rv3900c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv3896c (requalified) — transglycosylase Rv3896c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 cobQ1 (requalified) — cobyric acid synthase cobQ1 pirG (requalified) — exported repetitive protein pirG mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c blaC (requalified) — beta-lactamase blaC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.