MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3886c · 43 genes shown · anchor eccD2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 Rv3899c (family_assigned) — hypothetical protein Rv3899c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 espG2 (requalified) — type VII secretion system ESX-2 associated protein espG2 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 glpK (requalified) — glycerol kinase GlpK glpK mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 Rv3896c (requalified) — transglycosylase Rv3896c eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 Rv3657c (family_assigned) — membrane protein Rv3657c cut3 (family_assigned) — cutinase family protein cut3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 hsr1 (requalified) — hypothetical protein hsr1 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2114 (dark) — hypothetical protein Rv2114 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.