MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3883c · 44 genes shown · anchor eccE1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 espB (requalified) — type VII secretion system ESX-1 target EspB espB eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espL (requalified) — type VII secretion system ESX-1 associated protein espL eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 Rv2189c (dark) — hypothetical protein Rv2189c Rv2235 (family_assigned) — SURF1 family protein Rv2235 espI (family_assigned) — MinD/ParA family protein espI mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK espE (requalified) — type VII secretion system ESX-1 associated protein espE PPE68 (family_assigned) — PPE family protein PPE68 PPE68 eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c glpK (requalified) — glycerol kinase GlpK glpK eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 recR (requalified) — recombination mediator RecR recR espD (requalified) — type VII secretion system ESX-1 target EspD espD atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH esxA (requalified) — ESAT-6 protein EsxA esxA espF (requalified) — type VII secretion system ESX-1 associated protein espF esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU ripC (requalified) — peptidoglycan hydrolase RipC ripC pimB (requalified) — GDP-mannose-dependent alpha-(1-6)-phosphatidylinos pimB Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv1362c (family_assigned) — hypothetical protein Rv1362c rplJ (requalified) — 50S ribosomal protein L10 rplJ Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 Rv1456c (requalified) — heme A synthase Rv1456c ptpA (requalified) — protein-tyrosine-phosphatase ptpA ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c espJ (requalified) — type VII secretion system ESX-1 associated protein espJ eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.