MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3882c · 43 genes shown · anchor mycP1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 espB (requalified) — type VII secretion system ESX-1 target EspB espB esxA (requalified) — ESAT-6 protein EsxA esxA espL (requalified) — type VII secretion system ESX-1 associated protein espL Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 iniB (requalified) — isoniazid-induced protein IniB iniB Rv0658c (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0658c eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 espF (requalified) — type VII secretion system ESX-1 associated protein espF espI (family_assigned) — MinD/ParA family protein espI espE (requalified) — type VII secretion system ESX-1 associated protein espE PPE68 (family_assigned) — PPE family protein PPE68 PPE68 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB esxO (requalified) — type VII secretion system effector EsxO esxO esxW (requalified) — type VII secretion system protein EsxW esxW recR (requalified) — recombination mediator RecR recR espD (requalified) — type VII secretion system ESX-1 target EspD espD atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH eccE2 (family_assigned) — type VII secretion system ESX-2 subunit EccE2 eccE2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv3888c (family_assigned) — MinD/ParA family protein Rv3888c mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 glpK (requalified) — glycerol kinase GlpK glpK iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2209 (requalified) — MFS transporter Rv2209 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv1375 (family_assigned) — YcaO-like family protein Rv1375 vapB6 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB6 rsmA (requalified) — anti-sigma-M factor RsmA rsmA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.