MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3881c · 46 genes shown · anchor espL · open gene page → · ← back to 1 hop

Evidence: Min score 0
espB (requalified) — type VII secretion system ESX-1 target EspB espB espL (requalified) — type VII secretion system ESX-1 associated protein espL espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 espE (requalified) — type VII secretion system ESX-1 associated protein espE PPE68 (family_assigned) — PPE family protein PPE68 PPE68 Rv1075c (family_assigned) — SGNH/GDSL hydrolase family protein Rv1075c octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 Rv1975 (family_assigned) — CAP domain-containing protein Rv1975 Rv0157A (dark) — hypothetical protein Rv0157A recR (requalified) — recombination mediator RecR recR espD (requalified) — type VII secretion system ESX-1 target EspD espD atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 iniB (requalified) — isoniazid-induced protein IniB iniB PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 espI (family_assigned) — MinD/ParA family protein espI PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE35 (family_assigned) — PE family protein PE35 PE35 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB espJ (requalified) — type VII secretion system ESX-1 associated protein espJ eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c lipU (requalified) — lipase LipU lipU Rv0756c (family_assigned) — hypothetical protein Rv0756c Rv3662c (requalified) — oxidoreductase Rv3662c Rv1171 (family_assigned) — hypothetical protein Rv1171 gpgP (requalified) — glucosyl-3-phosphoglycerate phosphatase gpgP rsfS (requalified) — ribosome silencing factor rsfS nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD Rv2417c (family_assigned) — DegV family protein Rv2417c Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 Rv0517 (requalified) — acyltransferase Rv0517 pirG (requalified) — exported repetitive protein pirG Rv3707c (requalified) — hypothetical protein Rv3707c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.