MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3877 · 37 genes shown · anchor espI · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 espI (family_assigned) — MinD/ParA family protein espI esxA (requalified) — ESAT-6 protein EsxA esxA eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 espJ (requalified) — type VII secretion system ESX-1 associated protein espJ Rv0658c (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0658c iniB (requalified) — isoniazid-induced protein IniB iniB espE (requalified) — type VII secretion system ESX-1 associated protein espE esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB PPE68 (family_assigned) — PPE family protein PPE68 PPE68 esxO (requalified) — type VII secretion system effector EsxO esxO esxW (requalified) — type VII secretion system protein EsxW esxW eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 espF (requalified) — type VII secretion system ESX-1 associated protein espF espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 espB (requalified) — type VII secretion system ESX-1 target EspB espB PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv1375 (family_assigned) — YcaO-like family protein Rv1375 vapB6 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB6 rsmA (requalified) — anti-sigma-M factor RsmA rsmA iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2209 (requalified) — MFS transporter Rv2209 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE34 (family_assigned) — PPE family protein PPE34 PPE34

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.