MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3874 · 30 genes shown · anchor esxA · open gene page → · ← back to 1 hop

Evidence: Min score 0
esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB esxA (requalified) — ESAT-6 protein EsxA esxA eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL esxW (requalified) — type VII secretion system protein EsxW esxW esxK (requalified) — type VII secretion system ESX-5 protein EsxJ esxK esxP (requalified) — type VII secretion system ESX-5 protein EsxJ esxP esxO (requalified) — type VII secretion system effector EsxO esxO PPE68 (family_assigned) — PPE family protein PPE68 PPE68 esxN (requalified) — ESAT-6 like protein EsxN esxN cspA (requalified) — cold shock protein CspA cspA eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 espF (requalified) — type VII secretion system ESX-1 associated protein espF esxI (requalified) — type VII secretion system ESX-5 protein EsxL esxI PPE18 (family_assigned) — PPE family protein PPE18 PPE18 esxV (requalified) — ESAT-6 like protein EsxV esxV espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 espE (requalified) — type VII secretion system ESX-1 associated protein espE PE35 (family_assigned) — PE family protein PE35 PE35 espJ (requalified) — type VII secretion system ESX-1 associated protein espJ rpsL (requalified) — 30S ribosomal protein S12 rpsL rplO (requalified) — 50S ribosomal protein L15 rplO tuf (requalified) — elongation factor Tu tuf rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpmE (requalified) — 50S ribosomal protein L31 rpmE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.