MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3873 · 25 genes shown · anchor espG1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE68 (family_assigned) — PPE family protein PPE68 PPE68 espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 espE (requalified) — type VII secretion system ESX-1 associated protein espE PE35 (family_assigned) — PE family protein PE35 PE35 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB espJ (requalified) — type VII secretion system ESX-1 associated protein espJ eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 esxA (requalified) — ESAT-6 protein EsxA esxA espI (family_assigned) — MinD/ParA family protein espI espH (requalified) — type VII secretion system ESX-1 associated protein espH espF (requalified) — type VII secretion system ESX-1 associated protein espF PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL esxW (requalified) — type VII secretion system protein EsxW esxW eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU esxO (requalified) — type VII secretion system effector EsxO esxO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.