MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3871 · 35 genes shown · anchor eccCa1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxA (requalified) — ESAT-6 protein EsxA esxA espF (requalified) — type VII secretion system ESX-1 associated protein espF espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 PPE68 (family_assigned) — PPE family protein PPE68 PPE68 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL esxW (requalified) — type VII secretion system protein EsxW esxW eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 esxT (family_assigned) — WXG100 family type VII secretion target esxT eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 espH (requalified) — type VII secretion system ESX-1 associated protein espH espI (family_assigned) — MinD/ParA family protein espI espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 esxO (requalified) — type VII secretion system effector EsxO esxO espE (requalified) — type VII secretion system ESX-1 associated protein espE Rv3657c (family_assigned) — membrane protein Rv3657c mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 cut3 (family_assigned) — cutinase family protein cut3 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 PE35 (family_assigned) — PE family protein PE35 PE35 espJ (requalified) — type VII secretion system ESX-1 associated protein espJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.