MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv3870 · 32 genes shown · anchor eccCb1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 esxA (requalified) — ESAT-6 protein EsxA esxA espF (requalified) — type VII secretion system ESX-1 associated protein espF espG1 (requalified) — type VII secretion system ESX-1 adaptor EspG1 espG1 espH (requalified) — type VII secretion system ESX-1 associated protein espH esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 mltG (requalified) — endolytic transglycosylase MltG mltG espE (requalified) — type VII secretion system ESX-1 associated protein espE esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU espI (family_assigned) — MinD/ParA family protein espI espK (family_assigned) — ESX-1 secretion-associated protein EspK espK esxO (requalified) — type VII secretion system effector EsxO esxO esxW (requalified) — type VII secretion system protein EsxW esxW PPE68 (family_assigned) — PPE family protein PPE68 PPE68 esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 espB (requalified) — type VII secretion system ESX-1 target EspB espB aroE (requalified) — shikimate dehydrogenase aroE alaS (requalified) — alanine--tRNA ligase alaS ruvX (requalified) — Holliday junction resolvase RuvX ruvX Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.